Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRVIVLGSGVIGVASAYYLARQGAEVTVLDRQSGPAEETSFGNAGQISPGYSTPWAAPGIPFKAVKWMFQHHAPLAINLDGSMWQLQWMAQMLKNCNPQSYAVNKERMMRVAEYSRDCLRELRKDTGIHYENRAKGTLQLFRKEAQMEAVQRDISVLEECGVSYELLNGNELGRVEPALANAQDKLVGGLHLPNDETGDCYLFTNALAQIAKELGVNFQFNQNVEKLIVEGDQIKGVQVNGKVLTADRYVLAFGSYSRDFLKPLDLQLPVYP---VKGY------SLTIPIVAPAFAPQSTVLDETY-----------KIAITRFDQRIRVGGMAELSGFNLGLNEDRHATLQMVTQDLFPGGDMEQASFWTGLRPMTPDSTPIIG-ATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLNHKTDISTDGLSIQRYSHAHAA
1L9C Chain:A ((6-377))--VIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGS------------------------------HHGDTRIIR-------------------HAYGEGRE-YVPLALRSQELWYELEKET--HHKIFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPEN--YNAIFEPNSGVLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANGS-YTADKLIVSMGAWNSKLLSKLNLDIPLQPYRQVVGFFESDESKYSNDIDFPGFMVE--VPNGIYYGFPSFGGCGLKLGYNTFGQKIDPDTINR----EFGVYPEDESNLRAFLEEYMPGANGELKRGAVCMYTKTLDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLSQLALTGKTEHDISIFSINR-------


General information:
TITO was launched using:
RESULT:

Template: 1L9C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2191 -113432 -51.77 -323.17
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.70

3D Compatibility (PKB) : -51.77
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_1L9C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1L9C-query.scw
PDB file : Tito_Scwrl_1L9C.pdb: