Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANLKEIRAKVASIKSTQKITRAMQMVAASKMRRAQERMAQGRPYADNMRRVIAHLVQANPEYKHRYMVDRPVKRVGYIIVSSDRGLAGGLNINLFKKVVQHVKAQQEQSIEVQFALIGQKAVSFF-KNYGGKVLGATTQIGDAPSLEQLTGSVQVMLDAFDKG-ELDRIYLVSNGFVNAMTQKPKVEQLVPLAPAEEGDDLNRTYGWDYIYEPEAEELLNGLLVRYIESMVYQGVIENVACEQSARMVAMKAATDNAGQLIKDLQLIYNKLRQAAITQEISEIVGGAAAV
2W6H Chain:G ((1-272))-ATLKDITRRLKSIKNIQKITKSMKMVAAAKYARAERELKPARVYGVGSLALYEKADIKTPE-----LI---------IGVSSDRGLCGAIHSSVAKQMKSEAANL----KEVKIIGVGDKIRSILHRTHSDQFLVTFKEVGRRPP--TFGDASVIALELLNSGYEFDEGSIIFNRFRSVISYKTEEKPIFSLDTISSAESMS-------IYDDIDADVLRNYQEYSLANIIYYSLKESTTSEQSARMTAMDNASKNASEMIDKLTLTFNRTRQAVITKELIEIISGAAAL


General information:
TITO was launched using:
RESULT:

Template: 2W6H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain G - contact count / total energy / energy per contact / energy per residue : 1100 -25924 -23.57 -99.33
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain G : 0.77

3D Compatibility (PKB) : -23.57
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.505

(partial model without unconserved sides chains):
PDB file : Tito_2W6H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W6H-query.scw
PDB file : Tito_Scwrl_2W6H.pdb: