Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKLKELAGCEECDTVYRRV-PLAYGKRAYCVCCGAELYRHTKPFTTLLALILTALIVFVIANSFPIVKIELQGNISETTLLGAVWVMFHYDRAFVGVLILITTFIVPLTYLLLLGYVLGTVSILKKRPQFLVGALRTLYFMRVWGMVEVFLIGILVTLVKLMGMVLVIPEIALWAFAVLSLLMVYITSVKVSDIWNEIDRSQPWQK
3VPB Chain:E ((2-37))----VVLKCPVCNGDVNVPDDALPGEIVEH-ECGAQLEVYN---------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3VPB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 101 -9126 -90.35 -260.73
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain E : 0.35

3D Compatibility (PKB) : -90.35
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.35
QMean score : 0.641

(partial model without unconserved sides chains):
PDB file : Tito_3VPB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VPB-query.scw
PDB file : Tito_Scwrl_3VPB.pdb: