Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--------------------PEGTVALQARYPANNKKAGKVN----AAANNGTAAG--GNVNGTADFGKCKPTMSFKTGRPGRKATEGTFLPDDELVAKGQQDALNPNIITNRICDQLTNVCSANAAAKTQCAAAKAMVSSL-GTKDSSTADAFNKALGF------------------------------------------------------------------------------------------------------
2XQH Chain:A ((23-280))SDAKASGEFSVAVGNGARATEKASTAVGSWAAADGKQSTALGVGTYAYANASTALGSVAFVDNTATYG----TAAGNRAKVDKDATEGTALGAKATVTNKNSVALGANSVTTRDNEVYIGYKTGTESDKTYGTRVLGGLSDGTRNSDAATVGQLNRKVGGVYDDVKARITVESEKQKKYTDQKTSEVNEKVEARTTVGVDSDGKLTRAEGATKTIAVNDGLVALSGRTDRIDYAVGAIDGRVTRNTQSIEKNSKAIAANTRT


General information:
TITO was launched using:
RESULT:

Template: 2XQH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 888 70357 79.23 545.40
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 79.23
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.247

(partial model without unconserved sides chains):
PDB file : Tito_2XQH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XQH-query.scw
PDB file : Tito_Scwrl_2XQH.pdb: