Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence--WTGKSEASNRPPPGRRPEETTWFTSDPSYACGVKIFRPGSEGSSGLAEITHLNFHEKIK-----V-LKGQYECEVGPSCSTLR----CTMPRGWRLDIFGKSFPTRRTTYFAENGNPEYNTLAS-EANIPLYD---------------CRVVIRFPPTGGR------DTGPLAEATHFNLGEVV-GVLGGRHTCQAQGQCANVNCNVPKGYTYYSLTG--GPFQTKEKSHTFQSDA
3MYX Chain:A ((4-238))QPTVLLLARADLSPVGTEFTTGPIDAHDPFDSGRRTAFVDEQGIAAGIVEFGTALSVEAYPYTEMLVMHRGSVTLTSGTDSVTLSTGESAVIGRGTQVRIDAQPESLWAFCASTQASGPDKSGITALDRLALLTPSSPPDPSIMISPLPQCRSNNLFEDTASTLRIGVWDSTPYERISRPHKIHELMNLIEGRVVLSLEN---GSSLTVNTGDTVFVAQGAPCKWTSTGYVRKFYAVT


General information:
TITO was launched using:
RESULT:

Template: 3MYX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 987 31115 31.52 157.15
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 31.52
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.281

(partial model without unconserved sides chains):
PDB file : Tito_3MYX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3MYX-query.scw
PDB file : Tito_Scwrl_3MYX.pdb: