Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MAAQV--------TLEDALSNVDLLEELPLPDQQPCIEP---------PPSSLLYQPNFNTNFEDRNAFVTGIARYIEQATVHSSMNE--MLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVTKLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCSVKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLA-NHNKITQSLQQQLEVISGYEELLADIVNLCVDYYENRMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLSKIDKYFKQLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCTSSGSSPQYNICEQMIQIREDHMRFISE------LARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGLQLLSQWSAHVMEVYSWKLVHPTDKYSNKDCPDSAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTVYAALQDFSQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWETGH--------------EPFNDPALR-GEKDPKSGFDIKVP---RRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESFFYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASMMEYVLYSLDLYNDSAHYALTRFNKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKVMAGSLLLDKRLRSECKNQGATI--HLPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAAMYKSLELAIGRFESEDLTSIVELDGLLEINRMTHKLLSRYLTLDGFDAMFREANHNVSAP-YGRITLHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLHGSKALNLAYSSIYGSYRNFVGPPHFQVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKICRLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQN--LREVGNAILFCLLIEQSLSLEE-----VCDLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYAPLHLVPLIERLGTPQQIAIAREGDL-LTKERLCCGLSMFEVILTRIRSFLDDPIWRG---------PLPSNGVMHVDECVEFHRLWSAMQFVYCIPVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFAVLDFCYHLLKVQKHDGKDEIIKNVPLKKMVERIRKFQILNDEIITI----LDKYLKSGDGEGTPVEHVRCFQPPIHQSLASS----------
5IKY Chain:A ((2-1106))VKTFYITAAPVGAVPKFLDPLEPKFIPHALLELLPADRREATIKALEANGWEAVPAGGIVREYGYDAPIDLTDY---------ASATVHDALRNNGWTPSGSVWHR---TQTSPSLAQPPLITRNTLERL----SSVDLVRQIVLQLTTFGWTATED-----GSLTW--AHDRIHTYLSPDFVERMRADNA--AVLDSLFENGW-----------------RMCGAGHWQPGKARSPYLPITANGIVDASREALR--EG-----AAVVHLHTR---------ATDDQATLAIPGLNTPIGIGSQRNHIVLDDYDRIMPTLLDLEPSAILNLS--------------TSARGDRRASQ--------SP----------LRRAHLKRYGHAQLAPDVASFSPGPVVFQAGG-------------------GYDNPNAFLADQLAHFAEVGVRPEIEVFNHTIVENSVTLY---QSPLVKAGVPVLFMLVAAVDQYHRDPVSGDTSDDSLIDVPTRKAIAKLLQAGTDDAHEKAVELAATQLRPTVEKLRDNFPSCKISLLLPGPFQALLVDVAIALDLDGIRVGLEDALNVFDARVPGGVRKACG-TGDQVRWLRRELER----------------RGIGIVDAETLRDE-------------------------------LGMSR-------------PDVALFRQAEAALAHY---PADERLVSADTILDAL------HPIVDTYRKIEDRLAAHLASAP-------ADPAALAEHVLTAARSFGITIRSFVEELDRYED-----HEYLVARYI--------QIPQALNFARELLV----------------------------PRGYSIEAYDRALEDYSYSVRVDQFKPLPLRCLEYLV--GIP-CRYNSDYSNVVNLGLRQSP-----RYSATMALLYHALRELTLELRDRSNASRKACGP--------------LWTVLETVRRDVAPDELAAAIASVDWVVLPSTPTTNYPLGIKLSNGMAQLFHGFVAQIAADPPLRLLAITHSGRRDDGETVIEASMLHNRFALNADPSGIYFSEESQLIYERLILPRLVDKPAKLAYTERQLRINAEQIERLPLLKCFAHSSGIATAQQLDVQACRDGERLGLT-----GDELRAFFDRALLVSFGSAADIHLDWLGTSVVDVTAFNDVRSLAGTTSRHYVIQPGEHADVLQHCLVHT------------------QPADYRYDHATPVWQDGRQG--------KIVARLTGVFLLDDHARLDDGHSIRRYLAA------SPLWLRQWIARFHDAPADTGAHAILRELQ


General information:
TITO was launched using:
RESULT:

Template: 5IKY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 5319 73121 13.75 75.85
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 13.75
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.168

(partial model without unconserved sides chains):
PDB file : Tito_5IKY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IKY-query.scw
PDB file : Tito_Scwrl_5IKY.pdb: