Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQSITSQGLVLYNRNFREDDKLVKIFTEQVGKRMFFVKHAGQSKLAPVIQPLVLARFLLRINDDGLSYIEDYHEVMTFPKINSDLFVMAYATYVAALADASLQDNQQDAPLFAFLQKTLELMEAGLDYQVLTNIFEIQILTRFGISLNFNECVFCHRVGQAFDFSFKYGTCLCPEHYHEDERRCHLNPNIPYLLNQFQAIDFETLETISLKPGIKQELRQFMDQLYEEYVGIHLKSKKFIDSLADWGQLLKEEKK
4BBR Chain:M ((22-51))------------------------------------------------------------------------------------------------------------------------------------------------------LTCPECKVYPPKIVERFSEGDVVCALCGLV----------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4BBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain M - contact count / total energy / energy per contact / energy per residue : 72 -14732 -204.60 -491.05
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain M : 0.49

3D Compatibility (PKB) : -204.60
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.234

(partial model without unconserved sides chains):
PDB file : Tito_4BBR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BBR-query.scw
PDB file : Tito_Scwrl_4BBR.pdb: