Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIQWWQILLLTLYSAYQICDELTIVSSAGSPVFAGFITGLIMGDVTTGLLIGGNLQLFVLGVGTFGGASRIDATSGAVLATAFSVSQGIDAPLAITTIAVPVAALLTYFDVLGRMTTTFFAHRVDAAIERFDYKGIERNYLLGAIPWALSRALPVFFALAFGGAFVQSVVDFVEAYKWVADGLTLAGRMLPGLGF--AILLRYLPVKRNLHYLAMGFG---LTAMLTVLYSYVTGLGGAVAGIVGTLPAEVAQKIGFVNNFKGLSMIGISIVGIFLAVLHFKNSQKVAVAAPSTPSESGEIEDDEF
2B2I Chain:A ((8-74))---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WILASTALVMLMVPGVGFFYAGMVRR---KNAVNMIALSFISLIITVLLWIFYGYSVSFGNDISGIIGGL-----------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2B2I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 82 -20338 -248.02 -328.02
target 2D structure prediction score : 0.45
Monomeric hydrophicity matching model chain A : 0.48

3D Compatibility (PKB) : -248.02
2D Compatibility (Sec. Struct. Predict.) : 0.45
1D Compatibility (Hydrophobicity) : 0.48
QMean score : -0.004

(partial model without unconserved sides chains):
PDB file : Tito_2B2I.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2B2I-query.scw
PDB file : Tito_Scwrl_2B2I.pdb: