Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKLKKEKKMAEFTFEIEEHLLTLSENEKGWTKEINRVSFNGAPAKFDIRAWSPDH---TKM-GKGITLSNEEFQTMVDAFKGN
1PCF Chain:E ((69-119))------------------------------MRYVSVRDFK-GKVLIDIREYWMDPEGEMKPGRKGISLNPEQWSQLKEQISD-


General information:
TITO was launched using:
RESULT:

Template: 1PCF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 123 3520 28.61 74.88
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain E : 0.66

3D Compatibility (PKB) : 28.61
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.325

(partial model without unconserved sides chains):
PDB file : Tito_1PCF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1PCF-query.scw
PDB file : Tito_Scwrl_1PCF.pdb: