Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVKELFMKKQNLFLVLLSVFLLCLGACGQKESQTGKGMKIVTSFYPIYAMVKEVSGDLNDVRMI-QSSSGIHSFEPSANDIAAIYDADVFVYHSHTLESWAGSLDPNLKKSKVKVLEASEGMTLERVPGLEDVEAGDGVDEKTLYDPHTWLDPEKAGEEAQIIADKLSEVDSEHKETYQKNAQAFIKKAQELTKKFQPKFEK--ATQKTFVTQHTAFSYLAKRFGLNQLGIAGISPEQEPSPRQLTEIQEFVKTYKVKTIFTESNASSKVAETLVKSTGV---GLKTLNPLESDPQNDKTYLENLEENMSILAEELK
5UYE Chain:A ((38-302))---------------------------------TAKKFKVVTTFTIIQDIAQNIAGDVAVVESITKPGAEIHDYQPTPRDIVKAQSADLILWNGMNLERWFEKFFESIKDVPSAVVTA--GIT--PLPIREGPYSG-------IANPHAWMSPSNALIYIENIRKALVEHDPAHAETYNRNAQAYAEKIKALDAPLRERLSRIPAEQRWLVTSEGAFSYLAKDYGFKEVYLWPINAEQQGIPQQVRHVIDIIRENKIPVVFSESTISDKPAKQVSKETGAQYGGVLYVDSLSGEKGPVPTYISLI--NMTV------


General information:
TITO was launched using:
RESULT:

Template: 5UYE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1332 34304 25.75 132.45
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 25.75
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_5UYE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5UYE-query.scw
PDB file : Tito_Scwrl_5UYE.pdb: