Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIRIDIPHHPYDIQIEKGCMAQAGQWLRELWQPQKVVIVTDNHVASLYAEKVK--LSLEDAGFQVAVFDFLEGEERKNLTTVQKVYEFLVKQGLTRSDGIVALGGGVVGDLAGFVASTYMRGIHFVQIPTSLTAQVDSSIGGKTGVNTPFAKNMVGTFAQPDGVLIDPLVLETLGKRELIEGMGEVIKYGLI------EDPELW----ALLTGLNGSVESILEHAETLIEHSCQVKRKMVVEDELDNGIRLYLNFGHTIGHAIEATAGYGKVMHGEAVAMGMVQISKIAEEKGLMPAGITQSITEMCQKFGLPVDY-ENWEVDKLYQALTHDKKARGNTLKLVLVPELGSATIHPV-------SLEEMKDYLVK
1XAG Chain:A ((1-353))MKLQTTYPSNNYPIYVEHGAIKYIGTYLNQFDQS---FLLIDEYVNQYFANKFDDILSYEN----VHKVIIPAGEKTKTFEQYQETLEYILSHHVTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFKQILSGYAEVYKHALLNGESATQDIEQHFKDREILQSLNGMDKYIAKGIET--------KLDIVVADEKEQGVRKFLNLGHTFGHAVEY---YHKIPHGHAVMVGIIYQFIVANALFDSKHDISHYIQYLIQ-LGYPLDMITDLDFETLYQYMLSDKKNDKQGVQMVLMRQFGDIVVQHVDQLTLQHACEQLKTYF--


General information:
TITO was launched using:
RESULT:

Template: 1XAG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1793 -54898 -30.62 -164.86
target 2D structure prediction score : 0.69
Monomeric hydrophicity matching model chain A : 0.80

3D Compatibility (PKB) : -30.62
2D Compatibility (Sec. Struct. Predict.) : 0.69
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_1XAG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1XAG-query.scw
PDB file : Tito_Scwrl_1XAG.pdb: