Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSQLYDITIVGGGPVGLFAAFYAHLRQAKVQIIDSLPQLGGQPAILYPEKEILDVPGFP-NLTGEELTNRLIEQLNGFDTPI---HLNETVLEIDKQEEEFAITTSKGSHLTKTVIIAMGGGAFKPRPLELEGVEDYENIHYHVSNIQQ---YAGKKVTILGGGDSAVDWALAFEKIAPTT-LVHRRDNFRA----LEHSVQALQESSVTIKTPFAPSQLLGDGKTLDKLEITKVKSDETETIDLDHLFVNYGFKSSVGNLKNWGLDLNRHKIIVNSKQE-----SSQAGIYAIGDCCYYDGKIDLIATGLGEAPTAVNNAINYIDPEQKVQPKHSTSL 5VT3 Chain:A ((12-317)) ------LLILGSGPAGYTAAVYAARANLNPVLITGMQQ-GGQ---LTTTTEVENWPGDPEGLTGPGLMDRMKEHAERFETEIIFDHINE----VDFSTRPFVLKGDAASYSCDALIISTGASA---KYLGLESEEAFKGRGVSACATCDGFFYRNQKVAVVGGGNTAVEEALYLSNIAAEVHLIHRRDSFRAEKILINRLMDKVQNGNIVLHTDRVLDEVLGDEMGVTGVRLKDVKTGGTEELDVMGAFIAIGHSPNTQIFQGQ-LDMKDGYILVKSGLEGNATQTSVEGIFAAGDVMDHNYRQAITSAGTG--CMAALDAERYLD-------------

General information: TITO was launched using: RESULT: Template: 5VT3.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1588 30568 19.25 105.77 target 2D structure prediction score : 0.63 Monomeric hydrophicity matching model chain A : 0.74 3D Compatibility (PKB) : 19.25 2D Compatibility (Sec. Struct. Predict.) : 0.63 1D Compatibility (Hydrophobicity) : 0.74 QMean score : 0.496

(partial model without unconserved sides chains): PDB file : Tito_5VT3.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5VT3-query.scw PDB file : Tito_Scwrl_5VT3.pdb: