Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------------------------------MEESKELNAVIDVIMLAG--TILLKSGSEIHRVEDTMIRIAHSQGIVDCNVLAMPAAIFFSIENTNISRMKRVTSSSYNIEKVCDV----NQISRQLVGGQID-----LETAFKQLTALQAQPLPYTKLQVTLAATFSAPFFSVMFSGNIYDA--------LGAGVATLFGFAFSLYVEKFIRIPFVTAFAGAFVFGIIAQFWARYTGFPSTADLIIAGAVMPFVPGIAL-TNAVRDIMTNHINSGMSKMF-------ESLLIT----------------LALGAGTSVALVLMN---
4FHL Chain:A ((2-392))GSMTLSSNQYQLPLNVRPYTTTWCSQSPSCSNLLAIGHDTGITIYCASEESTGLTLQELFTIQTGLPTLHLSFSSSCSYSENSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLTELVKNPWLLTLNTLPLVNSSLANVRWIGSDGSGILAMCKSGAWLRWNLFKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLMGFT


General information:
TITO was launched using:
RESULT:

Template: 4FHL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1342 -64282 -47.90 -255.09
target 2D structure prediction score : 0.21
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : -47.90
2D Compatibility (Sec. Struct. Predict.) : 0.21
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.028

(partial model without unconserved sides chains):
PDB file : Tito_4FHL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4FHL-query.scw
PDB file : Tito_Scwrl_4FHL.pdb: