Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-MEYKLFEEFITLQALLKE--------LGITHSGGAIKSFLSEHSVYFNRELESRRGKKLRIGDKV------DIPDMNIDILLTQP---TSEEQDEYQADKVEKERIAKLVKKMNKG----VKKDKSKPASSPKSQQAPRFPGR--------------------
3Q87 Chain:B ((1-164))MDWYEPGEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRNTVVSTDLNIRALESHRGGNLVRADLLCSINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAVTVGMLYLLVIEANRPKEVLARLEERGYGTRILKVRKILGETVYIIKGEKS


General information:
TITO was launched using:
RESULT:

Template: 3Q87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 603 53896 89.38 441.77
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : 89.38
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.227

(partial model without unconserved sides chains):
PDB file : Tito_3Q87.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3Q87-query.scw
PDB file : Tito_Scwrl_3Q87.pdb: