Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDSSNQLMPLSLSAPGVNLGAYISTVNQIPILTAEQEKELAERY-----------------------------YYDQDLDAAK-MLVMSHLRFVVHIARSYAGYGLPQGDLIQEGNLGLMKAVKRFDPNMGVRLVSFAVHWIKAEIHEYVIRNWRIVKIAT---------TKAQRKLFFNLRSLKKSSKKLTLEEAQSIANDLNVTPEQVLEMEGRLTAYDAAFEAQGDDDDDTPHTAPVLYLEDNR----YDPARLVENEDWEEQSTSALHDAMNQLDDRSRNILQRRW--LDDDKSTLHELAAEYNVSAERIRQLEKNAMEKIKVAMSAS
5TW1 Chain:F ((163-453))----------------ADSVRAYLKQIGKVALLNAEEEVELAKRIEAGLYATQKLAELAEKGEKLPVQQRRDMQWICRDGDRAKNHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDL------GREPTPEE---LAKEMDITPEKVLEIQQYAREPISLDQTIGD--DSQLGD----FIEDSEAVVAVDAVSFTLLQD-------QLQSVLETLSEREAGVVRLRFGLTDGQPRTLDEIGQVYGVTRERIRQIESKTMSKLR------


General information:
TITO was launched using:
RESULT:

Template: 5TW1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 661 24594 37.21 100.80
target 2D structure prediction score : 0.70
Monomeric hydrophicity matching model chain F : 0.73

3D Compatibility (PKB) : 37.21
2D Compatibility (Sec. Struct. Predict.) : 0.70
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.496

(partial model without unconserved sides chains):
PDB file : Tito_5TW1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5TW1-query.scw
PDB file : Tito_Scwrl_5TW1.pdb: