Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIGQQRNILATLGIDVWIPRTQVCQKNNAHTLWRDQVVEPHESITVPTIDVPAFEQKNTQPQVFEIPKVVEEPPIVVAEVSQPEILVEKPKVIEQETITPFELQAYCLEKCVIFVDVTALETEEKQLWANIQKAKVGRYSELRWPFPLAAYQDQRGVGSYIQGFLDAVAAEKKILCLGKCAYIQHANIIHLASLKEMLDKPLLKKRLWQLMQDNNE
2MNJ Chain:A ((1-23))--------------------------------------GPHMSVQIPVVEVDELPEGYDRS-----------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2MNJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 8 133 16.63 5.78
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.53

3D Compatibility (PKB) : 16.63
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.504

(partial model without unconserved sides chains):
PDB file : Tito_2MNJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2MNJ-query.scw
PDB file : Tito_Scwrl_2MNJ.pdb: