Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFLSQIDEMLIGDLDLQFVMPWEFEDLNPEAFREFNRELYAHRFDLDYESYSVDNDIDLHLSNYYSSCETNKLIPSNCFFKLVEYMLVVLESRSFTSLFSNCVEFYNTKYSNEYLTFFLNLFSTSKSEVARDNLRMYITEIFDDKRYWANNELFDDSLLFEENLQQLQIIRVM
5HMO Chain:A ((1-131))------QKQLRGQIARRVYRQLLAEKRAEEEKRKREEEEKRKREEEERERERERREAELRAQQEEAARKQREL--------------------------------EALQQESQRAAELSRELEKQKENKQVEEILRLEKEIEDLQRMKERQELS----LTEASLQKLQQLRDE


General information:
TITO was launched using:
RESULT:

Template: 5HMO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 37 334 9.03 2.55
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : 9.03
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.57
QMean score : -0.097

(partial model without unconserved sides chains):
PDB file : Tito_5HMO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5HMO-query.scw
PDB file : Tito_Scwrl_5HMO.pdb: