Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIDTQLTTLFCLIDDFCTDITQNVEQYMLTYGQTKRLRQSKIHASEVITLLLWFHLTGSRNFKAFYLYWAKPFLCSYFTNLPSYSRFIELKAKYAMYFVALIESLKVHSAGIAFIDSTKLAVCHNKRIHQHRVFADSASRGKTSVDWFYGFKIHLICDHIGRLVSYCITTGNVDDRKVLPDLIEHSKLKGKLFGDRGYVGKNWKSRLAEVGVQLITRVKRNMKPQVLAPFDHAVLKKRGIIEAPFKLMKSQFDLEHSRHRSKMGLLTTIFAALTLYALVLVNGYKSGIQQILKPIDLNSA
1BIF Chain:? ((38-250))------CPTLIVMVGLPAR-------------GKTYISKKLTRYLNFIGVPTREFNVGQYRRDMV------KTYKSFEFFLPDNEEGLKIRKQCALAALNDVRKFLSEEGGHVAVFDAT-----NTTRERRAMIFNFGEQNG----------------------YKTFFVESICVDPEVIAANIVQVKLGSP-----DYVNRDSDEATEDFMRRIECYEN-------------------------------SYESLDEEQDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYYLMNIHVTPR


General information:
TITO was launched using:
RESULT:

Template: 1BIF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 985 -103929 -105.51 -487.93
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -105.51
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.180

(partial model without unconserved sides chains):
PDB file : Tito_1BIF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BIF-query.scw
PDB file : Tito_Scwrl_1BIF.pdb: