Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEFVFNGFYTLISAVIVLLLGRFLVNRIDFLERYNIPEPVAGGLVAAVVSLLVHTFWGYSIVFSSELQTSFMLVFFASIGLSANFMKLKEGGTALVIFLICVASFIVVQNAVGMSLATLLGLDPLIGLIAGSITLTGGHGTAGAWGEILESQHGIQGALALGMASATFGLIMCVIGGPLAKLLINRYSLAQAKTNAEIQQRDTHVEQNSDDLAPFENPHQVRLITADNAITTLGMFAACLAFAEFMTGFSKGTWFELPTFVWALGGGVILRNILESVLKVDIFDRAIDVFGNASLSLYLAMALLSLKLWQLADLAGPLVVILVAQTLTMALYAAFVTFRVMGKNYD-AAVLAASHCGFGMGATPTAVANMQAITNMYGPSHKAFLIVPLCGAFFVDLINATVIQLMLKFIA
4D0A Chain:B ((14-135))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVLGSLVAKIAE--KLKIPDIPLLLLLGLIIGPFLQIIPS-DSAMEIFEYAGPIGLIFILLGGAFTMRISLLKRVIKTVVRLDTITFLITLLISGFIFNMVLNLPYTSPVGYL---FGAITAATDPAT--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4D0A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 183 -39264 -214.56 -324.50
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.49

3D Compatibility (PKB) : -214.56
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.49
QMean score : 0.037

(partial model without unconserved sides chains):
PDB file : Tito_4D0A.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4D0A-query.scw
PDB file : Tito_Scwrl_4D0A.pdb: