Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIIKEPVMSEFEGKSGKWAWEIQKEQQANLDELRSSIEYLVQKYKHDAHASSIFGDQDKTRIYNRFVNQLEHLLKGDA
2YA1 Chain:A ((630-659))---------------------------------LIDSIKYLVDTYKVDGFRFDMMGDHDAASI----------------


General information:
TITO was launched using:
RESULT:

Template: 2YA1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 30 -6583 -219.42 -219.42
target 2D structure prediction score : 0.53
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -219.42
2D Compatibility (Sec. Struct. Predict.) : 0.53
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.540

(partial model without unconserved sides chains):
PDB file : Tito_2YA1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YA1-query.scw
PDB file : Tito_Scwrl_2YA1.pdb: