Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKMNMPVQHILQSVDWSKYSFEEWCRQLGAWLNGDTEIMVKIVKTMPTKRITQKQREKLIAMYMSDENLKDRLCTRRKGTCCQLNDNEARALHRLIIDIKLIEDHILQDWISAIWSHHVMGNSLRDIAQSNDTSVNQIRQDLKCGLAYIKSRNPQFKFETFEKTA
1RP3 Chain:A ((187-230))-----------------------------------------------------------------------------------------------------------EREKLVIQLIFYEELPAKEVAKILETSVSRVSQLKAKALERLRE--------------


General information:
TITO was launched using:
RESULT:

Template: 1RP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 117 -17806 -152.19 -404.68
target 2D structure prediction score : 0.84
Monomeric hydrophicity matching model chain A : 0.57

3D Compatibility (PKB) : -152.19
2D Compatibility (Sec. Struct. Predict.) : 0.84
1D Compatibility (Hydrophobicity) : 0.57
QMean score : 0.552

(partial model without unconserved sides chains):
PDB file : Tito_1RP3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RP3-query.scw
PDB file : Tito_Scwrl_1RP3.pdb: