Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAGCG-CASTCSPTKKASPRFRKALWIALVINALMFVVEIVGGYQAQSVSLWADALDFAGDAANYALSLVVLSMSLYWRATAALVKGITMAAFGFFVIAKVVWSFFHGVSPEPMVMGAIGVIALIANVSVALMLYAFRDGDANMRSVWLCSRNDSIANIAVVLAAVGVFGTGTIFPDLFVAFVIAYLGVSSGYAVIKQSLQERKQSKLMLGSEA
1WM8 Chain:A ((1-28))-VGCEECPMHCKG-KNANPTCDDGVCNCNV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1WM8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 52 -1082 -20.80 -40.06
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.41

3D Compatibility (PKB) : -20.80
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.41
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_1WM8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1WM8-query.scw
PDB file : Tito_Scwrl_1WM8.pdb: