Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKTETTIQGLAASLNPARAARKIIGFVPTMGNLHEGHLTLVREAKKLCDVVVVSIFVNPTQFGPGEDFDNYPRTLEQDSRLLADVGCDIIFAPSVEQMYGTQPRLTNISVSQITDDLCGSSRPGHFDGVALVVTKLFNIVQPNYAFFGQKDYQQLAVIRQFVQDLNIPLEVIGVPIVRAEDGLALSSRNGYLTPEQRQVAPVIYQGLKQAEEQLHQG-KDLQQVLADLKTLLTDNGFV-VDYVEARQPNLLAASQFDRDIVL-FVAAKLGGTRLIDNLQVAFTPQ
3UY4 Chain:A ((8-281))----TSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHAKTQ-DKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMY-LKNFSTYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMVDDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKNTSKIIQAMKDILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNFLV-----


General information:
TITO was launched using:
RESULT:

Template: 3UY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1375 -140557 -102.22 -518.66
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -102.22
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.615

(partial model without unconserved sides chains):
PDB file : Tito_3UY4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3UY4-query.scw
PDB file : Tito_Scwrl_3UY4.pdb: