Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIFYDKDCDLSIIQSKKVAIIGYGSQGHAHALNLKDS------GVDVTVGLRAGSASWKKAENAGLK-----VAEVPAAVKQADLVMILTPDEFQSQLYRDVIEPNIKEGATLAFAHGFSVLYNQVVP---RKDLDVIMVAPKAPGHTVRSEFQRG-----SGVPDLIAIHQDASGNARNVALSYASGVGGGRTGIIETSFREETETDLFGEQAVLCGGAVELVKMGFETLVEAGYAPEMAYFECLHELKLIVDLMFEGGIADMNYSVSNNAEYGEYVTGPEVINEQSREAMRNALKRIQSGEYAKMFIQEGALNYPSMTARRRQNAAHGIEQTGAKLRAMMPWIQANKIVDKEKN
3FR8 Chain:A ((55-278))----------------KQIGVIGWGSQGPAQAQNLRDSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETVSGSDLVLLLISDAAQADNYEKIFS-HMKPNSILGLSHGFLLGHLQSAGLDFPKNISVIAVCPKGMGPSVRRLYVQGKEINGAGINSSFAVHQDVDGRATDVALGWSVALGSPFT--FATTLEQEYKSDIFGERGILLGAVHGIVEALFRRYTEQGMDEEMAY------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3FR8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1056 10970 10.39 53.51
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : 10.39
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.400

(partial model without unconserved sides chains):
PDB file : Tito_3FR8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3FR8-query.scw
PDB file : Tito_Scwrl_3FR8.pdb: