Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MRNVSMTQRISEVVRNTNETKIRVRLNLDGTGQGTLNTGVPFLDHMIDQIKQHGLFDIDIHCDGDLEIDDHHTVEDCGITLGQAFAQALGDKKGLRRYGHFYAPLDEALSRVVVDLSGRPGLFMDIPFTRARIGTFDVDLFSEFFQGFVNHALMTLHIDNLKGKNSHHQIESVFKALARALRMACEIDPRAENTIASTKGSL 5DNL Chain:A ((3-176)) --------------RTTKETDIIVEIG----KKGEIKTNDLILDHMLTAFAFYLGKDMRITATYDLR---HHLWEDIGITLGEALRENLPEK--FTRFGNAIMPMDDALVLVSVDISNRPYANVDVNIKDAEEG-FAVSLLKEFVWGLARGLRATIHIKQLSGENAHHIVEAAFKGLGMALRVATKESERVE----STKGVL

General information: TITO was launched using: RESULT: Template: 5DNL.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 955 -135488 -141.87 -778.67 target 2D structure prediction score : 0.70 Monomeric hydrophicity matching model chain A : 0.77 3D Compatibility (PKB) : -141.87 2D Compatibility (Sec. Struct. Predict.) : 0.70 1D Compatibility (Hydrophobicity) : 0.77 QMean score : 0.433

(partial model without unconserved sides chains): PDB file : Tito_5DNL.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5DNL-query.scw PDB file : Tito_Scwrl_5DNL.pdb: