Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSTQPMIEKLIEAHLDFLDEQFAQTQVIQQEFEQFYHWLGSRQLQHLWTFEQVQQLIQKQILDTPASDFLIEQIAEHIRFALIHPTNDTATVEDVIPVLTIDRIAQYVASKEEHRKKLIKTIVNNPAFSALLTQLIQQTMHDYLDESMTKRVPGVGRFMKMGKSVLETVTDSNLDDTINHYLQKNILKLSQMSKRVLNQHFDNDKLYHFQANVWHKVKTSPLSVLKNYIEVQDLTRTVGLGHEIWDHIRQTDYLKQQVHDGIYTWYVRNQERNFDLLLRDLNIDENLVKHELTELLVPVLQQLVTTGHLRRRARVYLEKFYYSEKALEILNNKGA
4AJU Chain:A ((276-330))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TMLVVLMEKM-DHLALEDYLTT---DLVETWLRNMKTRNMEVFFPKFKLDQKYEMHEL-------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4AJU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 33 -7350 -222.73 -136.11
target 2D structure prediction score : 0.04
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -222.73
2D Compatibility (Sec. Struct. Predict.) : 0.04
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.186

(partial model without unconserved sides chains):
PDB file : Tito_4AJU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4AJU-query.scw
PDB file : Tito_Scwrl_4AJU.pdb: