Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNVIDALRKRRAVKRFDPAFQLSENDKKQLLQEVLANAPSAFNLQHWRPVIVEDAELRQKIRAIAW--------------DQPQVTESSLLIVLCAKVNTWEVDAKRVWDGASPEVQDIMVGAIDQYYRDRPQTQRDEVMRSAGIFAQTLMLLAQEHGLDSCPMDGFDFDAMAKLINLPEDHVVCLMIAVGKSASEPYLRVG--KLPYDDVIIQNTF
4G8S Chain:A ((24-206))-DTLEAIRTRRSVRAFSD--RPVEPEKLQMVLEAARQAPSWANMQCSRFVVVQDAEVKAKISELSFVEAFFAPLGYRTNPAQKALAEAPVVIVAC---------------GVPGESGDLRG---QQYY-----------MTDVGIATENLMLAAHAVGLGSVFVGVFGEEQLGDLLDIPPEIRIVGLFPLGYPR--------PARKPLDEIVFQG--


General information:
TITO was launched using:
RESULT:

Template: 4G8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 770 -47736 -61.99 -300.22
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -61.99
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.574

(partial model without unconserved sides chains):
PDB file : Tito_4G8S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4G8S-query.scw
PDB file : Tito_Scwrl_4G8S.pdb: