Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAQVQDPTFWGGNIAFWIQTLVFFISALIAIYTLRRNEAQAKKRATVDLVLSETQDMYFRDIKEKFGKYK
1K4U Chain:P ((359-390))----------------------------------SKPQPAVPPRPSADLILNRCSESTKRKLASAV----


General information:
TITO was launched using:
RESULT:

Template: 1K4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain P - contact count / total energy / energy per contact / energy per residue : 54 -1423 -26.35 -44.47
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain P : 0.53

3D Compatibility (PKB) : -26.35
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.53
QMean score : 0.415

(partial model without unconserved sides chains):
PDB file : Tito_1K4U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1K4U-query.scw
PDB file : Tito_Scwrl_1K4U.pdb: