Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTAMLPEWTTACPDWEERIVAKKSLMPCEPLFPQVADVAERIFKELILVDVMGSPKMGDVTLDWVIEFVRAIFGSYNPNTKRRLIREFFLLISKKNTKSTIAAGVMLVALLLNDRLSAELIILAPTKEVADNSFNPIRDFIRADEELSAMI-N-VSEH---------TKTVTH----LGTGATLKVIAAE-SNAAAGKKASIILIDEVWLFGKRANAESMF-REAKGGLASRPEGCVIYLSTMSDEVPCGVFKQLLDYARDVRDGIKEDKGFLPLIYEFPKRLVEAGEHLKPEHFYITNPNLGASVDLEYLISEFKKVKDAGEESLRDFLAKHLNIEIGMNLRANRWAGAEYWNKQKHVFGLDQLIEQSDVITIGIDGGGLDDLLGYAVLGRLKKDPRVWWLWNHAWANKIALERRKENIPKYDDFKLEGSLTVVDRVGDDIDQLAAIAKKVYDSGKLNKIGLDPLGLGGLLDGLLEAGIPEESMFAVPQGYKLMSYILTTERKLAEGNLYHAGQQLMTWAAGNARVVMVGNGMRITKQESGVGKIDPLIATFNAVALMSMNPEPTNKEYNVFFV
4ZNK Chain:A ((21-198))----------------------------------------------------------YKPHHVQLAIHRST------------AKRRVACLGRQSGKSEAASVEAVFELFA--RPGSQGWIIAPTYDQAEIIFGRVVEKVERLAEVFPATEVQLQRRRLRLLVHHYDRPVNAPGAKRVATSEFRGKSADRPDNLRGATLDFVILDEAAM----IP-FSVWSEAIEPTLSV-RDGWALIISTPKGL---NWFYEFFLMG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4ZNK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 768 -63426 -82.59 -393.95
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -82.59
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_4ZNK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZNK-query.scw
PDB file : Tito_Scwrl_4ZNK.pdb: