Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHYSRLKLTVQTPLKLKDLTYKFVVTNNSTKKKTEFEGRFDDQGLTGWTEIYNLNTSLIYEVYLRGEILQKIAVKAYPNKKTHSVFTIKVTSEITKNVKENIKEIYLNDGEVAWYLIKKTETMLDWSKRVFKKPLNVSDWDTLKANNPHIPNMAPIRLLSPGMVVVLSNSTTAKELPRYKKEAQEAQKRLEEMKKDKDFDAEFFAQNYEFFYDALNDSRTEITNENIFTNNDHPLIYQLDGSENESGVAWGSIGKGGIDATLAFHEGTVTRMNQIHGELALKMAEERAKGSGLANPKNFKAFRQKYKDLYKALDHEYSKGVFKWDRSIKTNNMRRIINQSSLARGVTYKGGMKEYVEKMGELGKMSKVIKGGGYLFLALDIYNASDAIANAKPEEK---AKTAVVETSKIAGGLAGGAVGAFIVLTVATGGTSLIVLGVAAGASALVGWAGGEVGGYLGKEGYELISK
4R04 Chain:A ((1034-1065))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VSTILDGINLGAAIKELLDEHDPLLKKELEAK--------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4R04.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 44 3359 76.34 115.83
target 2D structure prediction score : 0.17
Monomeric hydrophicity matching model chain A : 0.52

3D Compatibility (PKB) : 76.34
2D Compatibility (Sec. Struct. Predict.) : 0.17
1D Compatibility (Hydrophobicity) : 0.52
QMean score : 0.361

(partial model without unconserved sides chains):
PDB file : Tito_4R04.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R04-query.scw
PDB file : Tito_Scwrl_4R04.pdb: