Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFRIFTIFLLILSTNIEAKEKLITGEKIASSYKLLQSMTIPAIYENGMVLTKYANLYKMDNQCVIVSKLDNESNFGGYEDIIYFKNGIMLRSSKQSFFSIFLDDEAKIKSKEIKYGDFLNGKEVQKGLKEDFIQYRKKFNKYTLSKCS
5K36 Chain:H ((166-230))-----------------------------------------------------------------------------------FLKEGDLLNAEVQSLFQ---DGSASLHTRSLKYGKLRNG---------------------------


General information:
TITO was launched using:
RESULT:

Template: 5K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 59 2356 39.92 65.43
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain H : 0.55

3D Compatibility (PKB) : 39.92
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.55
QMean score : 0.330

(partial model without unconserved sides chains):
PDB file : Tito_5K36.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5K36-query.scw
PDB file : Tito_Scwrl_5K36.pdb: