Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAKMNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRMREEGLRITGVTTSNATKEQAEKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSSKLVDKLGKFPLPVEVIPYGSQQLLHIFEEKRFQPVLRTDENGEVLTTDGGHYIIDLHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKV-VVGSEKGVEILDAIRRK
1O8B Chain:A ((23-217))-----------------------IVGVGTGST--------------EG----AVSSSDA------------FDLNEVDSLGIYVDGADEINGHMQMIKGGG-ALTREKIIASVAEKFICIADASKQVDILGKFPLPVEVIPMARSAVARQLVKLGGRPEYR-----QGVVTDNGNVILDVHGMEILDPIAMENAINAIPGVVTVGLFANRGADVALIGTPDGVKTI------


General information:
TITO was launched using:
RESULT:

Template: 1O8B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 924 -82096 -88.85 -494.55
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -88.85
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.439

(partial model without unconserved sides chains):
PDB file : Tito_1O8B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1O8B-query.scw
PDB file : Tito_Scwrl_1O8B.pdb: