Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRRKQGMPTINQLVRKPRKSKVEKSNSPALNKGYNSFKKTQTNVNSPQKRGVATRVGTMTPKKPNSALRKYARVRLSNLIEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIVRGALDTAGVNDRKQSRSKYGTKKPKA
4OX9 Chain:L ((2-123))--------PTINQLVRKGREKVRKKSKVPALK-------------GAPFRRGVCTVVRTVTPKKPNSALRKVAKVRLTSGYEVTAYIPGEGHNLQEHSVVLIRGGRVKDLPGVRYHIVRGVYDAAGVKDRKKSRSKYGTKKPK-


General information:
TITO was launched using:
RESULT:

Template: 4OX9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 498 -27695 -55.61 -227.01
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain L : 0.88

3D Compatibility (PKB) : -55.61
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.88
QMean score : 0.541

(partial model without unconserved sides chains):
PDB file : Tito_4OX9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OX9-query.scw
PDB file : Tito_Scwrl_4OX9.pdb: