Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTTEHFDLANPV------------TKVDDIPDYEMYSQTIDSLNKRF--GNRVLKGIKIGYIASEKDRIIDYLADK--DYDLKLLSVHHNG-QF---DYL--DDEVK------DMDPAIVIPQYFAQLSEALVV--IE--ADVFAHFDYGFRVFGLSVAE---F-KQYEAQFLPILDQVIKNKLAFELNAKSAYLYD-N-LALYEYVIDLCLSRGGTLF
3DCP Chain:B ((36-254))SIVEHAPLSSEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYEDFTRDFLNEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLAYLEGVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVKKRDYELDFNTAGLFKPLCGETYPPKKIVTLASELQIPFV


General information:
TITO was launched using:
RESULT:

Template: 3DCP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 814 18748 23.03 103.58
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.65

3D Compatibility (PKB) : 23.03
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.378

(partial model without unconserved sides chains):
PDB file : Tito_3DCP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DCP-query.scw
PDB file : Tito_Scwrl_3DCP.pdb: