Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLETAIEVLEKCAQLVTASEEWGYESVTMEKEEIE--MGMLPEDVTLPRLVMTHLYIYCAPEDGKDYVVYFITDITSQREFVRGLLVEGRLVWSQIGGTNE----
4LYL Chain:B ((3-84))NLSDIIEK-ETGKQLVIQ------ESILMLPEEVEEVIGNKPES---------DILVHTAYDESTDENVMLLTSDAPEYK-------PWALVIQDSNGENKIKML


General information:
TITO was launched using:
RESULT:

Template: 4LYL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 298 -4035 -13.54 -53.09
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain B : 0.62

3D Compatibility (PKB) : -13.54
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.449

(partial model without unconserved sides chains):
PDB file : Tito_4LYL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LYL-query.scw
PDB file : Tito_Scwrl_4LYL.pdb: