Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMISIIWFLFFFIFFSYLKVIKIDSFLVYHTSAMKNLTQNLLKKDNSSILKIELKKENNKSMKISKKAFLLVVLILLSTLYSVNFMRNAQEIYTTGDLSFHLSRIKGLSSIFE--GPINYTTFNNYGDGLNYFYPFLTIIPAVVFYGISN-----NLILSYVLYIWLLNICTILISFWERQ
3WAJ Chain:A ((43-188))-------------------------------------------------------------------------------------------LGGNDPWYYYRLIENTIHNFPHRIWFDPFTYYPYGSYT--HFGPFLVYLGSIAGIIFSATSGESLRAVLAFIPAIGGVLAILPVYLL--


General information:
TITO was launched using:
RESULT:

Template: 3WAJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 223 -51288 -229.99 -657.53
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -229.99
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.179

(partial model without unconserved sides chains):
PDB file : Tito_3WAJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WAJ-query.scw
PDB file : Tito_Scwrl_3WAJ.pdb: