Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MERFDVERMIQMKIFVVGANGQIGRHLIKDLA---PSSHEIFAGVRDVASQTLVKKENVSYVSFDLTWSVEKMTEAFKGIDVLIFAAGSQGKN-LLQVDLDGAIKTVIAAENAHVSRYLMVSAVYADEPAKWPESMTDYYITKHYADEWLKR-TNLDFVILQPVTLTNDEEVTSIQLTKPNEKASKTITRSTVAAVLAALVEETDISRTTLVLSEGSKELNTAFQEWAKEE 2VRC Chain:D ((1-139)) -----------FSIAVTGATGQLGGLVIQHLMAAVPAS-QIIAIVRNVEKASTLADQGVEVRHGDYNQP-ESLQKAFAGVSKLLFISGPHYDNTLLIVQHANVVK---AARDAGVKHIAYTGYAFAEE-SIIPLAHV------HLATEYATRTTNIPYTFLR---------------------------------------------------------------------

General information: TITO was launched using: RESULT: Template: 2VRC.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 622 -30892 -49.66 -230.53 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain D : 0.68 3D Compatibility (PKB) : -49.66 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.68 QMean score : 0.591

(partial model without unconserved sides chains): PDB file : Tito_2VRC.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2VRC-query.scw PDB file : Tito_Scwrl_2VRC.pdb: