Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMERTAIVIQDLSAAYQGKTVLKTINLTINPQKITGIIGPNGAGKSTFMKSLLELIPATTGKVTFSGQSVN------SVRKKIAYVEQRSELDLSFPI-DVLGVVLLGTYPSLRIGQRPGKKEKERARQALKKVGMEEYAKRQISELSGGQLQRVFIARALAQGAEWIFLDEPFVGIDALSERKIFDILQELKNSGKTILIVHHDLHKVEEYFDEVILLNK-QLIASGPVQEVFTSKNLQLAY-GEIIRHLVKGGEKK
4P31 Chain:A ((3-234))-----LTAKNLAKAYKGRRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPLHARARRGIGYLPQEASIFRRLSVYDNLMAVL-QIRDDLSAEQR-----EDRANELMEEFHIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQDEHVKRVYL--------------


General information:
TITO was launched using:
RESULT:

Template: 4P31.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1175 -44591 -37.95 -199.96
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.78

3D Compatibility (PKB) : -37.95
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.564

(partial model without unconserved sides chains):
PDB file : Tito_4P31.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4P31-query.scw
PDB file : Tito_Scwrl_4P31.pdb: