Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSIQVKNIEKHFGAFHALKNISLDFPEGELVALLGPSGCGKTTLLRIIAGLESAEGGQVLLEGEYATNVHVRERQVGFVFQHYALFRHMTVFDNIAFGLRVRPRATRPSEAEIKKRVTRLLDLVQLGFLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRNLHDELHITSIFVTHDQEEALEVADQIIVMNKGNVEQIGSLREVYEKPATPFVFDFLGQA--NRFEGEHASGIIR---IG-----NDR--IELPTTVQAPQGKVIAFARPDELHIHAQPQANTIEATFVREVWIAGKVVAELQDRNGR-LIEIALSSEAAKQHAFKPNQTVWVSASQLHLFADQVA
3RLF Chain:A ((2-358))ASVQLQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGA----KKEVINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKMNFLPVKVTATAIDQVQVELPMPNRQQVWLPVESRDVQVGANMSLGIRPEHLLPSDIA-DVILEGEVQVVEQLGNETQIHIQIPSIRQNLVYRQND----VVLVEEGATFAIGLPPERCHLFRED


General information:
TITO was launched using:
RESULT:

Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1686 -170790 -101.30 -496.48
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -101.30
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.476

(partial model without unconserved sides chains):
PDB file : Tito_3RLF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RLF-query.scw
PDB file : Tito_Scwrl_3RLF.pdb: