Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLYHHLTAINQYFLHSRMFNDWGIEQLGSAEYKESIRQMKHADKIIERILFLEGLPNLQHLGKLYIGQHTEEVLQCDIRKVKENIEAIQKAVALAETEQDYVTRDLVQEILEKEEEYWDWLDTQIDLIGSVGIENYIQSQM
5D8R Chain:D ((14-154))ILGNELIAINQYFLHSRMWNDWGLKRLGAHEYHESIDEMKHADKLIERILFLEGLPNLQDLGKLLIGANTQEMLQCDLNLELKATKDLREAIVHCEQVHDYVSRDLLKDILESEEEHIDYLETQLGLIQKVGLENYLQSHM


General information:
TITO was launched using:
RESULT:

Template: 5D8R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 504 -43666 -86.64 -309.69
target 2D structure prediction score : 0.80
Monomeric hydrophicity matching model chain D : 0.91

3D Compatibility (PKB) : -86.64
2D Compatibility (Sec. Struct. Predict.) : 0.80
1D Compatibility (Hydrophobicity) : 0.91
QMean score : 0.593

(partial model without unconserved sides chains):
PDB file : Tito_5D8R.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5D8R-query.scw
PDB file : Tito_Scwrl_5D8R.pdb: