Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHIAALHQPSQVQLNQDGNLKHFLTIEGLSKENLTKILDTAQSFLDDNNNLINRPLLEGRTVMNLFFENSTRTRTTFEAAAKRLSANVLNIDIARSSTSKGETLRDTLWNLEAMAADIFVVRHSSSGAAHFIAKDVCPKVAIINAGDGRHAHPTQAMLDMLTIRREMKKPFEDLSVAIIGDIKHSRVARSDVAALQTLGCKDIRVIAPNTL-LPVGFSE----YGDHVRLFNNMDEGITGCDVIIALRIQNERIDSPALSSQSEFYRMYGLNKERLSLAKPDCIVMHPGPMNRGVEIDSSIADGEQSVILKQVTNGIAVRMAVLALSMQGQLQEQGLIDAIAL
5G1O Chain:F ((5-313))------------PLLHSLVGQHILSVQQFTKDQMSHLFNVAHTLRMMVQKERSLDILKGKVMASMFYEVSTRTSSSFAAAMARLGGAVLS---------KGESLADSVQTMSCY-ADVVVLRHPQPG--AVELAAKHCRRPVINAGDGVGEHPTQALLDIFTIREE-LGTVNGMTITMVGDLKHGRTVHSLACLLTQYRV-SLRYVAPPSLRMPPTVRAFVASRGTKQEEFESIEEALPDTDVLYMTRIQKERFGST--QEYEACFGQFILTPHIMTRAKKKMVVMHPMPRV--NEISVEVDSDPRAAYFRQAENGMYIRMALLATVLGR-------------


General information:
TITO was launched using:
RESULT:

Template: 5G1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1554 -111231 -71.58 -377.05
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain F : 0.74

3D Compatibility (PKB) : -71.58
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.551

(partial model without unconserved sides chains):
PDB file : Tito_5G1O.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5G1O-query.scw
PDB file : Tito_Scwrl_5G1O.pdb: