Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVQVKLLDPRLGKEWPLPSYATAGSAGLDLRACLDEAIEIEPGQTVLVKTGMAIYIHDVNFAGLILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSVWNRGQTTFRLEPGERLAQYVLVPVVQAEFEQVEEFEETLRGAGGFGHTGKQ
2OKD Chain:C ((14-131))----------KETNRAKSPTRQSPGAAGYDLYSA--YDYTIPPGERQLIKTDISMSMP-KFCYGRIAPRSGLS-LKGIDI--GGGVIDEDYRGNIGVILINNGKCTFNVNTGDRIAQLIYQRIYYPELEEVQSL----------------


General information:
TITO was launched using:
RESULT:

Template: 2OKD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 494 -68889 -139.45 -583.81
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain C : 0.76

3D Compatibility (PKB) : -139.45
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.497

(partial model without unconserved sides chains):
PDB file : Tito_2OKD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2OKD-query.scw
PDB file : Tito_Scwrl_2OKD.pdb: