Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSKDTIIALHAEHQGRWKNREEIAERMIALIGQLYREKNIVVSVYGRSLINRSVIQILKTHRRTRVVDVELSVVNTFPILEALAKVENIGSAEVDIGKLAVEYKEKGGDVDAFVAQAVESIKGSATSEQPKDVVLYGFGRIGRILARLIISQSGLGRGLSLKAIVVRKSSDGDLAKRASLLRRDSIHGTFAGTISVDEENEAIIANGNFIKVIYASSPSEVDYTQYGIENALLIDNTGKWRDAEGLSQHLKCPGVARVVLTAPSKGEMKNVVFGVNNSDILDEDKIISAASCTTNAITPILKVLDDKYKVLNGHVETVHSFTNDQNLIDNYH---KADRRGRAATLNMVITETGAAKAVAKALPALKGKLTGNSVRVPTPNVSLAILNLTLDKEVDREEVNEYIRQISINSNLQGQIGYTNSTEVVSSDFIGSRTAGVYDAQATITSG-NRLTAYVWYDNEVGYSCQVLRIAEQMCGVSYKKIPAETNA
1YWG Chain:O ((1-336))-------------------------------------------------------------------------------------------------------------------------------MAVTKLGINGFGRIGRLVFRAAFGR----KDIEVVAINDP---FMDLNHLCYLLKYDSVHGQFPCEVTHA--DGFLLIGEKKVSVFAEKDPSQIPWGKCQVD--VVCESTGVFLTKELASSHLK-GGAKKVIMSAPPKDDTPIYVMGINHHQYDTKQLIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHASTANQLVVDGPSKGGKDWRAGRCALSNIIPASTGAAKAVGKVLPELNGKLTGVAFRVPIGTVSVVDLVCRLQKPAKYEEVALEIKKAA-EGPLKGILGYTE-DEVVSQDFVHDNRSSIFDMKAGLALNDNFFKLVSWYDNEWGYSNRVLDLAVHITN------------


General information:
TITO was launched using:
RESULT:

Template: 1YWG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain O - contact count / total energy / energy per contact / energy per residue : 1965 -127839 -65.06 -385.06
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain O : 0.71

3D Compatibility (PKB) : -65.06
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.546

(partial model without unconserved sides chains):
PDB file : Tito_1YWG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1YWG-query.scw
PDB file : Tito_Scwrl_1YWG.pdb: