Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRNEMMHRPVVKEELLDFMRTQQKKLPGELGKLEEEAHVAEVPVIPHETVVFLKFLLGQLQPERILEIGAAIGFSSSVMATTIGENAHVTTIDRFDVMIEKAKKNYERLGLTDKVTLLEGQAADILPELSGPYDFIFMDSAKSKYIEFLPECLRLLRKGGVLMVDDIFQGGTILLPDEEIPRGKRAIHRKLNEFLRVVMDHPDLTSTILPLGDGVILMTKESETIEL
3C3P Chain:A ((5-210))---------IVDSRIGAYLDGLLPEADPVVAAMEQIARERNIPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIA-AGQRDIDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRG------------------ALREFNHHLSRRRDFFTTIVPVGNGVLLGYRLS-----


General information:
TITO was launched using:
RESULT:

Template: 3C3P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1035 -152936 -147.76 -788.33
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.72

3D Compatibility (PKB) : -147.76
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.577

(partial model without unconserved sides chains):
PDB file : Tito_3C3P.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C3P-query.scw
PDB file : Tito_Scwrl_3C3P.pdb: