Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDLSEKVIVIMGASSGIGEATTKLLAEKGAKLVIAARREDRLKAIKESLP--EAELYIQTADVRDFAQVQAVIDLAMEKFGRIDVLYNNAGIMPTAPLVEGHRDEWQNMLDINIMGVLNGISAVLPIMEKQKSGHIISTDSVAGHVVYPDSAVYCGTKFAVRAIMEGLRQEQRQNNIKSTIISPGAVQTELYQTISDKKAALELHEAQKEWGLTSEDIASAVAFAIETPDRMSVSNMIIRPTTQEV
3TFO Chain:B ((3-239))----MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSVVPTAAVYCATKFAVRAISDGLRQES--TNIRVTCVNPGVV-----------------------IALQPADIARAVRQVIEAPQSVDTTEITIRPTA---


General information:
TITO was launched using:
RESULT:

Template: 3TFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1179 -63806 -54.12 -299.56
target 2D structure prediction score : 0.75
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : -54.12
2D Compatibility (Sec. Struct. Predict.) : 0.75
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.602

(partial model without unconserved sides chains):
PDB file : Tito_3TFO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TFO-query.scw
PDB file : Tito_Scwrl_3TFO.pdb: