Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR
4S0M Chain:H ((1-143))MAIERTLSIVKPDAVSKNHIGEIFARFEKAGLKIVATKMKHLSQADAEGFYAEHKERGFFGDLVAFMTSGPVVVSVLEGENAVLAHREILGATNPKEAAPGTIRADFAVSIDENAAHGSDSVASAEREIAYFFADNEICPRTR


General information:
TITO was launched using:
RESULT:

Template: 4S0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain H - contact count / total energy / energy per contact / energy per residue : 652 -51969 -79.71 -363.42
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain H : 1.00

3D Compatibility (PKB) : -79.71
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 1.00
QMean score : 0.453

(partial model without unconserved sides chains):
PDB file : Tito_4S0M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4S0M-query.scw
PDB file : Tito_Scwrl_4S0M.pdb: