Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKGQTLQDPFLNSLRKERIPVSIFLVNGIKLQGHIESFDQYVVLLKNTVSQMVYKHAISTVVPARNPRPAGAQGAGFPAQGGSQGGFGGQGAGFGGAQGAGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGQGGFGGHQGGFGGHQGGFDNDSKFEDGQDDENNR
4RCB Chain:A ((5-69))----QSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVS----------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4RCB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 231 -47260 -204.59 -727.07
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -204.59
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.647

(partial model without unconserved sides chains):
PDB file : Tito_4RCB.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4RCB-query.scw
PDB file : Tito_Scwrl_4RCB.pdb: