Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQRNHICNIGGKNVGKPIISFDQVVKRYDDETVLKKVSFEIEQGKFYTLLGPSGCGKTTILRIIAGFTEATEGDIYFEGKRLNDLPANKRQVNTVFQDYALFPHMNVFDNVAFGLKIKKMSKSDIEKKVKDALRMVQLPGYEKREISEMSGGQRQRVAIARAIVNEPKVLLLDEPLSALDLKLRTDMQYELRDLQQRLGITFIFVTHDQEEALAMSDEIFVMNKGKIVQSGTPVDIYDEPINHFVADFVGES--NIVDGVMIEDN-L-VEF-VGKQFECV--D-GGMRLNEPVEVVLRPEDLTITTPD---KGKLVVTVDTQLFRGVHYEIICYDEQQNEWMVH--STKKAKEGSKVGLAFEPEDIHVMRFNESEEEFDARLDSYEE
4TQU Chain:T ((3-360))----------------ASVSIQNVVKRYDKTTVVHGVSLDIEPGEFVVLVGPSGCGKSTTLRMVAGLEEISGGTIRIDGRVINDLAPKDRDVAMVFQNYALYPHLNVRDNISFGLRLKRTKKSVIDAAVKTAADILGLQPLLERKPSDLSGGQRQRVAMGRAIVRDPKVFLFDQPLSNLDAKLRTQMRAEIKRLHQRLGTTVIYVTHDQVEAMTLADRIVVMRDGLIEQIGKPMDLFLHPANTFVASFIGSPPMNLMPARIAVDSTQHVELNGGNRISLLPRAGTHLAPGQEVVFGIRPEDVTLDGVEGSERAQIKATVDIVEPLGSESILHA-TVGDHSLVVKVGGLNEVHPGDPVTLHVDLTRVHLFDAQSQA------------


General information:
TITO was launched using:
RESULT:

Template: 4TQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain T - contact count / total energy / energy per contact / energy per residue : 1683 -149805 -89.01 -434.22
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain T : 0.82

3D Compatibility (PKB) : -89.01
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.487

(partial model without unconserved sides chains):
PDB file : Tito_4TQU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4TQU-query.scw
PDB file : Tito_Scwrl_4TQU.pdb: