Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRSQLTILTNICLIEDLETQRVVMQYRAPENNRWSG-YAFPGGHVENDEAFAESVIREIYEETGLTIQNPQLVGIKNWPLDTGGRYIVICYKATEFSGTL-QSSEEGEVSWVQKDQIPNLN-LAYDMLPLMEMMEAPDKSEFFYPRRTEDDWEKKIF
3GRN Chain:A ((2-139))-SLEKPYIISVYALIRN-EKGEFLLLRRSENSRTNAGKWDLPGGKVNPDESLKEGVAREVWEETGITMVPGDIAGQVNFELT-EKKVIAIVFDGGYVVADVKLSYEHIEYSWVSLEKILGMETLPAYFRDFFERFDRENKK-----------------


General information:
TITO was launched using:
RESULT:

Template: 3GRN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 631 -22542 -35.72 -166.97
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : -35.72
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.436

(partial model without unconserved sides chains):
PDB file : Tito_3GRN.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GRN-query.scw
PDB file : Tito_Scwrl_3GRN.pdb: