Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVQVKLLDPRLGKEWPLPSYATAGSAGLDLRACLDEAIEIEPGQTVLVKTGMAIYIHDVNFAGLILPRSGLGHKHGIVLGNLVGLIDSDYQGELMVSVWNRGQTTFRLEPGERLAQYVLVPVVQAEFEQVEEFEETLRGAGGFGHTGKQ
5F9K Chain:B ((5-130))--FKVKKL----SDKAIIPQRGSKGAAGYDLSSA--HELVVPAHGKALAMTDLQIAIP-DGTYGRIAPRSGLA-WKNFIDC-GAGVIDSDYRGNVGVVLFNHSDVDFKVAVGDRVAQLIFERIVTPEPLEVDEIDET-------------


General information:
TITO was launched using:
RESULT:

Template: 5F9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 556 -75217 -135.28 -596.96
target 2D structure prediction score : 0.57
Monomeric hydrophicity matching model chain B : 0.77

3D Compatibility (PKB) : -135.28
2D Compatibility (Sec. Struct. Predict.) : 0.57
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.389

(partial model without unconserved sides chains):
PDB file : Tito_5F9K.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5F9K-query.scw
PDB file : Tito_Scwrl_5F9K.pdb: